CDS

Accession Number TCMCG007C57346
gbkey CDS
Protein Id XP_033135964.1
Location complement(join(36199568..36199681,36199765..36199964,36200092..36200308,36200475..36200576,36200757..36200819,36201110..36201235,36201324..36201464,36201537..36201547,36201660..36201807,36201962..36202090,36202274..36202411,36202496..36202564,36202642..36202710,36203127..36203285,36203374..36203474,36203566..36203716,36203793..36203952,36204121..36204253,36204369..36204546,36204636..36204872,36204972..36205040,36205243..36205342,36205544..36205599))
Gene LOC103841646
GeneID 103841646
Organism Brassica rapa

Protein

Length 956aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033280073.1
Definition villin-3 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category Z
Description actin filament capping
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K05761        [VIEW IN KEGG]
ko:K05768        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04666        [VIEW IN KEGG]
ko04810        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map04666        [VIEW IN KEGG]
map04810        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0001558        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003779        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005884        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007015        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030834        [VIEW IN EMBL-EBI]
GO:0030835        [VIEW IN EMBL-EBI]
GO:0030837        [VIEW IN EMBL-EBI]
GO:0031333        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032272        [VIEW IN EMBL-EBI]
GO:0032432        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043242        [VIEW IN EMBL-EBI]
GO:0043244        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051014        [VIEW IN EMBL-EBI]
GO:0051015        [VIEW IN EMBL-EBI]
GO:0051017        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051494        [VIEW IN EMBL-EBI]
GO:0051693        [VIEW IN EMBL-EBI]
GO:0061572        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:1901879        [VIEW IN EMBL-EBI]
GO:1901880        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902904        [VIEW IN EMBL-EBI]
GO:2000012        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGGGCCAACAAAAGTATTGGATCCTGCATTTCAAGGAGCCGGGCAGAAACCAGGTACTGAAATCTGGAGAATCGAAAATTTTCAGCCAGTTCTAGTGCCCAAATCTGAACATGGGAAGTTCTATATGGGAGATACTTACATCGTCTTGCAGACAACACAAAATAAGGCGGGTGCTTATCTATTTGATATACATTTTTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAACAGCAGCTGTGAAGACGGTTGAACTTGATGCAGGTCTTGGAGGCCGAGCTGTCCAACACCGTGAAATTCAAGGTCATGAATCTGACAAGTTCTTGTCTTACTTCAAGCCTTGCATTATACCGCTAGAGGGTGGTGTTGCCTCTGGATTTAAAAAACTTGAGGAGGAGGAGTTTGAAACCCGATTGTATACCTGCAAAGGGAAACGTGCGGTCCACTTGAAGCAGGTTCCTTTTGCTCGGTCATCACTGAATCATGATGATGTGTTTATCTTGGACACCAAGGAAAAGATTTATCAGTTTAATGGTGCAAATTCAAATATCCAAGAAAGAGCTAAAGCGTTGGCAGTCGTCCAATATTTGAAAGACAAGTTTCATGAAGGAACATGTGACGTTGCTATCGTTGATGATGGAAAATTAGATACAGAATCAGATTCTGGCGAGTTCTGGGTCCTCTTTGGGGGTTTTGCTCCAATCGCTAGGAAAGTTGCTAGTGAGGATGACATTATTCCGGAGACAACTCCGCCTAAGCTTTATAGTATCGCTGATGGTCAGGTAGAATCTATAGATGGCAACTTATCCAAATCTATGATGGAAAACAATAAATGCTACCTTTTGGACTGCGGTTCTGAGGTATTTATCTGGGTTGGCCGAGTAACTCAAGTTGAAGAGAGAAAAACTGCTATCCAAGCTGCTGAGGACTTTGTTGCTAGTGAAAATAGGCCAAAGGCAACACGCATAACCCGTGTTATCCAAGGTTATGAGCCCCATTCTTTCAAGTCCAACTTTGACTCTTGGCCATCAGGCTCGGCAGCTCCTGCTAACGAAGAAGGACGAGGAAAAGTCGCTGCATTACTTAAACAACAAGGTGTTGGGTTAAAGGGCTTGTCAAAAAGTACACCAGTGAATGAGGATATTCCACCGCTGCTTGAAGGAGGTGGAAAGTTAGAGGTTTGGTACATCGATGATAAGGCCAAGACTCCTGTATCCAAAGATGATGTCGGAAAACTCTATTCTGGGGACTGCTATTTAGTCCTTTATGCCTACCATTCTGGTGAAAGGAAAGAAGACTACTTCTTGTGCTGCTGGTTTGGAAAGAATAGCATTCAGGAGGATCAAGAGACGGCAGTCCGTCTGGCTAGCACAATGACAAATTCTTTGAAGGGAAGACCAGTGCAGGCCCGTATCTTCGAGGGTAAAGAGCCTCCTCAATTTGTTGCGCTATTTGAACACATGGTGGTCCTTAAGGGTGGTTTGAGCTCTGGTTACAAAAATAGTGTGACAGAGAAAGGTTCAACAGACGAAACCTACATGCCGGAATCAATTGCACTTATTCAAGTGTCTGGAACTGGAGTTCACAATAACAAGGCATTACAAGTTGAACCGGTGGCAACTTCTTTGAACTCTTACGATTGCTTCCTTCTACAGTCCGGTACTTCCATGTTCTTATGGCATGGAAACCAAAGTACGCATGAGCAGCAAGAACTGGCTGCTAAAGTTGCCGAATTCTTAAAGCCTGGGGTTACTATCAAGCACGCTAAGGAAGGAACGGAAAGCTCATCCTTTTGGTTTGCACTTGGGGGAAAACAGAACTTCACCAGCAAGAAGGTTTCCCCTGAGACTGTCAGAGATCCTCACTTGTTCTCCTTTTCATTCAACAGAGGAAAATTTCAGGTTGAAGAGATTCACAACTTTGATCAAGATGACCTCTTGACGGAGGATATGCATTTACTAGATACTCACGCTGAAGTTTTTGTGTGGGTTGGTCAATGTGTGGACCCCAAGGAAAAGCAAACCGCCTTTGAGATTGGCCAAAGATACATAGATCTGGCTGGTTCCCTGGAAGGCTTATCTCCAAAAGTTCCTTTGTACAAAATCACTGAGGGGAATGAACCGTGCTTCTTCACCACTTATTTTTCGTGGGATGCTACTAAAGCGACTGTGCAAGGAAATTCCTTCCAGAAGAAGGCAGCATCATTACTGGGTACACACCACGTTGTGCAGGACCAGTCTAGCAGTGGAAACCAAGGACCAAGACAAAGGGCTGCTGCTCTAGCTGCCTTGACTTCCGCATTTAATTCTCCTTCTGGAGGGACAAGCTCTCCGAACCGGGACAGGCCAAATGGAAATCAAGGTGGTCCAAGACAAAGGGCTGAAGCGTTAGCCGCATTATCATCCGCGTTCAACTCTTCACCATCATCAAATTCACCTCCACAAAGACCAGGATTGACAAGCCGATCGTCACAAAGAGCAGCAGCACTGGCTGCTCTCTCGCAAGTTCTCACTAATGAGAAGAAGAAATCACCTGATACAAGCCCTTCCGCTGAAGCTAAAGATGAGAAAGCCTTCTCAGAAGCGGAGGCTTCTGAAGAATCTGCTGAAGCCAAGGAAGAAGAGGAAGTTTCACCTGCAGCAGACGCGATTGCTGAGGAAGCAGGAACAACTGGTGCAACTTTCACCTACCAACAGCTACAAGCCAAATCCGATAAACCAGTGAAAGGAATTGACTTCAAACGCAGAGAGGCTTACTTGTCTGAGGAAGAGTTCAAGACTGTATTTGGGATGGAGAAAGAAGCATTCTACAAATTGCCTAGATGGAAGCAAGATTTGCTGAAGAAGAAATTCAACTTGTTCTAA
Protein:  
MSGPTKVLDPAFQGAGQKPGTEIWRIENFQPVLVPKSEHGKFYMGDTYIVLQTTQNKAGAYLFDIHFWIGKDTSQDEAGTAAVKTVELDAGLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKKLEEEEFETRLYTCKGKRAVHLKQVPFARSSLNHDDVFILDTKEKIYQFNGANSNIQERAKALAVVQYLKDKFHEGTCDVAIVDDGKLDTESDSGEFWVLFGGFAPIARKVASEDDIIPETTPPKLYSIADGQVESIDGNLSKSMMENNKCYLLDCGSEVFIWVGRVTQVEERKTAIQAAEDFVASENRPKATRITRVIQGYEPHSFKSNFDSWPSGSAAPANEEGRGKVAALLKQQGVGLKGLSKSTPVNEDIPPLLEGGGKLEVWYIDDKAKTPVSKDDVGKLYSGDCYLVLYAYHSGERKEDYFLCCWFGKNSIQEDQETAVRLASTMTNSLKGRPVQARIFEGKEPPQFVALFEHMVVLKGGLSSGYKNSVTEKGSTDETYMPESIALIQVSGTGVHNNKALQVEPVATSLNSYDCFLLQSGTSMFLWHGNQSTHEQQELAAKVAEFLKPGVTIKHAKEGTESSSFWFALGGKQNFTSKKVSPETVRDPHLFSFSFNRGKFQVEEIHNFDQDDLLTEDMHLLDTHAEVFVWVGQCVDPKEKQTAFEIGQRYIDLAGSLEGLSPKVPLYKITEGNEPCFFTTYFSWDATKATVQGNSFQKKAASLLGTHHVVQDQSSSGNQGPRQRAAALAALTSAFNSPSGGTSSPNRDRPNGNQGGPRQRAEALAALSSAFNSSPSSNSPPQRPGLTSRSSQRAAALAALSQVLTNEKKKSPDTSPSAEAKDEKAFSEAEASEESAEAKEEEEVSPAADAIAEEAGTTGATFTYQQLQAKSDKPVKGIDFKRREAYLSEEEFKTVFGMEKEAFYKLPRWKQDLLKKKFNLF